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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808254.1_cds_XP_016495244.1_9578
CDS Infomation

[gene=LOC107814352] [db_xref=GeneID:107814352] [protein=indole-3-acetate O-methyltransferase 1-like] [protein_id=XP_016495244.1] [location=complement(join(12017..12373,13752..14027,15025..15444,15915..16034))] [gbkey=CDS]
Sequence

ATGGCTCCCTTAGGAGACAATAAGGACAACGTTGTTGTATCTAACATGAAACTTGAAAGA
ATGCTCAGCATGAAAGGGGGGAAAGGAGAGGCTAGCTACGTCAACAACTCTCAAGCTCAG
GGGCAACATGCTCGATCGATGCTACACCTACTGAAAGAAACCCTTGACGAAGTCCAGCTG
AGCCCACCGGATGTTCCTTTCGTGATCGTCGACTTGGGATGCTCCTGCGGCAGCAACACC
GTCTACATAATCGACGTGATTGTGGAACATATGAGCAAGCGATACGAAGCGATGGGTCTT
CAACCGCCTGAATTTTCTGCCTTCTTCTCTGATCTTCCTTCCAATGACTTCAACACGCTG
TTTCAGCTGCTGCCGCCGTTGGCTAATAATGCTTGTGGCAGCATGGAGGAATGCTTAGCT
TCCAATAGTCACCGCTCTTACTTCGCCGCCGGAGTTCCCGGTTCCTTTTATCGCCGTCTC
TTCCCGGCGAGATCCATTGACGTTTTCTACTCTGCATTTTCTTTGCACTGGCTTTCTCAG
GTTCCAGATATAGTGTTGGATAAGAGATCAGGGGCGTACAACAAGGGAAGGATATACATC
CACGGTGCAAATGAGAGCACAGCCAATGCATACAAAAAGCAATTCCAAAGTGATTTGGCT
AATTTTCTTGGAGCAAGGTCTAAAGAAATGAAGAGAGGGGGTTTCATGTTCTTAGTTTGC
TTAGGAAGAACCTCTGTGGACCCAACAGACCAAGGTGGGGCCGGACTCCTTTTTGGGACC
CATTTTCAAGATGCTTGGGATGATCTTGTCCAAGAGGGGCTAATTACAAGTGAGAAGAGG
GACAACTTCAACATCCCAGTGTATGCACCAAGCATACAAGATTTCAAGGAGGTGGTTGAA
GCCAACGGCTCATTCACTATCAACAAGCTTCAAGTCTTCAGGGGAGGGAGTCCTTTGGTT
GTCAACCACCCGGACGACGCAGCTGAAGTCGGACGAGCCTTAGCCATCAGCTGCAGAAGC
GTCAGTGGCGTCCTTGTCGATGCTCACATTGGCGAACAGCTCAGTGACAAGCTGTTCGCC
CGAGTTGAGCGCCGAGCTTCACGCCATGCAAAAGAGCTTATTGAAAAGCTTCAGTTTTCC
CATATTGTTGCTTCCCTTTCTCCTGCATACTAG

Peptide Sequence

PEP ID

XP_016495244.1
PEP Infomation

PREDICTED: indole-3-acetate O-methyltransferase 1-like [Nicotiana tabacum]
Sequence

MAPLGDNKDNVVVSNMKLERMLSMKGGKGEASYVNNSQAQGQHARSMLHLLKETLDEVQL
SPPDVPFVIVDLGCSCGSNTVYIIDVIVEHMSKRYEAMGLQPPEFSAFFSDLPSNDFNTL
FQLLPPLANNACGSMEECLASNSHRSYFAAGVPGSFYRRLFPARSIDVFYSAFSLHWLSQ
VPDIVLDKRSGAYNKGRIYIHGANESTANAYKKQFQSDLANFLGARSKEMKRGGFMFLVC
LGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLITSEKRDNFNIPVYAPSIQDFKEVVE
ANGSFTINKLQVFRGGSPLVVNHPDDAAEVGRALAISCRSVSGVLVDAHIGEQLSDKLFA
RVERRASRHAKELIEKLQFSHIVASLSPAY

Transcript Sequence

Gene sequence data has not been registered.